Skills

Technical

I am familiar with the following technologies. I have developed, tested, deployed, and supported new and established applications.

  • Programming languages:
    • Primary: Python, SQL
    • 2+ projects or occasional: bash, Clojure, R, SAS, Stata
    • One project or rarely: PL/PGSQL, VBA, XSLT, Powershell, PHP, JavaScript, Java, C#, C
  • Database Systems:
    • Primary: PostgreSQL
    • 2+ projects or occasional: SQLite, LibreOffice Calc / MS Excel
    • One project or rarely: MS Access, Microsoft SQL Server, Oracle DBMS
  • Other tools / systems:
    • Development: Git, Intellij IDEA / PyCharm, Notepad++, Metabase, RStudio, vim
    • OS/Environments: Linux (Ubuntu, Rocky), Windows, Android, Podman/Docker, libvirt/Hyper-V, AWS
    • Project Management: GitHub, Jira

My GitHub profile contains examples of projects where permission was given to share the code.

Clinical Trials Data Management

I am familiar with the following aspects of clinical trials and health research:

  • Ethics and regulatory requirements
    • TGA guidance on ICH GCP, the NHMRC National Statement, Australian Privacy Principles, GDPR
    • Standard regulatory forms including HREA (NEAF), SSA, CTN, and CIOMS SAE reports
    • Essential documents preparation from start-up to close-out in Australian and international trials in collaboration with hospitals, academic institutions, CROs, and pharmaceutical companies
  • Project management
    • Site initiation, delivering training for protocols and data systems
    • Design and implementation of data management plans, validation rules, interim analysis cleaning and centralised monitoring of key source documents
    • Development of documentation, procedures and operational frameworks for data systems development, data management workflows and data governance
  • Specialised data systems:
    • EDCs: OpenClinica, RedCap, InForm, ClinTrial
    • Surveys: ODK, LimeSurvey, TeleForm (OCR)
    • Labkey